A user's guide to the human genome - download pdf or read online

By Wolfsberg Tyra G., Wetterstrand Kris A., Guyer Mark S., Collins Francis S., Baxevanis Andreas D.

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Extra resources for A user's guide to the human genome

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Before considering the actual data within these tracks, a brief discussion of the content and representation of these tracks is warranted. Many were provided to UCSC by outside individuals. Further information on the gene prediction methods briefly discussed below can be found elsewhere15. The general convention for the Known Genes and predicted gene tracks (Fig. 1) is that each coding exon is shown as a tall, vertical bar or block. 5′ and 3′ untranslated regions are shown as shorter vertical bars or blocks.

These unique hits may represent real members of the ADAM family that have not yet been named and would therefore not show up in a text-based search. Alternatively, they may be unnamed pseudogenes or nonsignificant BLAST hits. One gene on chromosome 1 is found in the textbased search at the NCBI but not in the BLAST search at Ensembl. The similarity between this gene and ADAM2 is not high enough for it to appear in the BLAST search using the default Ensembl parameters. 6, respectively, for the hit on chromosome 12).

Many were provided to UCSC by outside individuals. Further information on the gene prediction methods briefly discussed below can be found elsewhere15. The general convention for the Known Genes and predicted gene tracks (Fig. 1) is that each coding exon is shown as a tall, vertical bar or block. 5′ and 3′ untranslated regions are shown as shorter vertical bars or blocks. Connecting introns are shown as very thin lines. The direction of transcription is indicated by the arrows along that thin line.

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A user's guide to the human genome by Wolfsberg Tyra G., Wetterstrand Kris A., Guyer Mark S., Collins Francis S., Baxevanis Andreas D.


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